ncRNA ID | novel_zma_miR11125 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:40685471-40685582 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583942 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGUCUUAGGUAGCAAACCAAA - 21 |
Stem-loop(if miRNA) |
--      C                 -A  UGUCUAACCCUAGUCGCUCGAAUUGA   UGGUUU CUACCUAAGGCGUCAUA  UC                          A   |||||| |||||||||||||||||  ||                          G   ACCAAA GAUGGAUUCUGCGGUGU  CA                          A AA      C                 UG  CAGAUUGAAAAGAUAGAUUGGAAUCA |
Stem-loop sequence | UGGUUUCCUACCUAAGGCGUCAUAAUCUGUCUAACCCUAGUCGCUCGAAUUGAAGAACUAAGGUUAGAUAGAAAAGUUAGACACGUUGUGGCGUCUUAGGUAGCAAACCAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ049437.1 |
|
0.0 | TSA: Zea mays contig50555, mRNA sequence | NA | coding protein | psRNATarget |