ncRNA ID | novel_zma_miR11123 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:59965538-59965639 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 23 |
Mature sequence(if miRNA) | 80 - GACAGAUCCUGUUAAGUUAUCCG - 102 |
Stem-loop(if miRNA) |
--      U   G         CC   G         AGUC    GAG   U   GACAGA CCU UUAAGUUAU  GGU CACAUGCAU    GUCU   GUC U   |||||| ||| |||||||||  ||| |||||||||    ||||   ||| U   CUGUCU GGA GGUUCAAUA  CCG GUGUACGUA    UAGG   CAG G CA      U   G         AC   G         --GA    -AA   A |
Stem-loop sequence | GACAGAUCCUGUUAAGUUAUCCGGUGCACAUGCAUAGUCGUCUGAGGUCUUUGAGACAAGGAUAGAUGCAUGUGGGCCCAAUAACUUGGGAGGUUCUGUCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ087213.1 |
|
1.5 | TSA: Zea mays contig22859, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ058335.1 |
|
1.5 | TSA: Zea mays contig59457, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT067946.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0003M08 mRNA, complete cds | NA | coding protein | psRNATarget |