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BaseInfo

ncRNA ID novel_zma_miR11118
Species Zea mays
Class miRNA
Genome position Chr7:27031102-27031153 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AUUAAAUGGGUCGUGCCUUGGGCC - 24
Stem-loop(if miRNA) --A              C  UG   CA
   UUAAAUGGGUCGUG CU  GGC  G
   |||||||||||||| ||  |||
   GAUUUACCCAGCAC GA  CCG  C
ACC              A  --   CU
Stem-loop sequence AUUAAAUGGGUCGUGCCUUGGGCCAGCUCGCCAGACACGACCCAUUUAGCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU951651.1
ncRNA:24   CCGGGUUCCGUGCUGGGUAAAUUA   1
  *|||=|||*||||=||||||||||
targets:177   AGCCUAAGACACGGCCCAUUUAAU   200

2.5 Zea mays clone 987855 mRNA sequence NA coding protein psRNATarget