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BaseInfo

ncRNA ID novel_zma_miR11113
Species Zea mays
Class miRNA
Genome position Chr7:24506922-24506982 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 22
Mature sequence(if miRNA) 1 - UUAUUUCGAAAGGUUUUUGGCU - 22
Stem-loop(if miRNA) --    UU  -       UU  GC  AG   G
  UUAU  CG AAAGGUU  UG  UG  GGC U
  ||||  || |||||||  ||  ||  |||
  AGUG  GC UUUCCGG  GC  AC  UCG C
AU    GG  C       UU  --  CA   U
Stem-loop sequence UUAUUUCGAAAGGUUUUUGGCUGAGGGCGUCUGCUACCACGUUGGCCUUUCCGGGGUGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008670637.2
ncRNA:22   UCGGUUUUUGGAAAGCUUUAUU   1
  ||*=|*||||||||||||||||
targets:792   AGGUAUAAACCUUUCGAAAUAA   813

2.0 PREDICTED: Zea mays ABC transporter I family member 1 (LOC103645915), mRNA NA coding protein psRNATarget
BT055738.2
ncRNA:22   UCGGUUUUUGGAAAGCUUUAUU   1
  |***||||||||||||||||*|
targets:943   AUGAAAAAACCUUUCGAAAUUA   964

2.5 Zea mays full-length cDNA clone ZM_BFb0156L24 mRNA, complete cds NA coding protein psRNATarget