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BaseInfo

ncRNA ID osa-miRf10708-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UUGAUGCCCGUCACAGAUGACUC - NA
Stem-loop(if miRNA)      ----    A                   --           A UAUA
CGGGC    AUUG UGCCCGUCACAGAUGACUC  AUUUGUGAUGG C    U
|||||    |||| |||||||||||||||||||  ||||||||||| |
GCCCG    UGAU GCGGGCAGUGUCUACUGGG  UAGAUACUGCC G    U
     GUGU    C                   AA           C UAGU
Stem-loop sequence CGGGCAUUGAUGCCCGUCACAGAUGACUCAUUUGUGAUGGACUAUAUUUGAUGCCCGUCAUAGAUAAGGGUCAUCUGUGACGGGCGCUAGUUGUGGCCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288447.1
ncRNA:23   CUCAGUAGACACUGCCCGUAGUU   1
  ||||||||*|||||||||||=||
targets:424   GAGUCAUCGGUGACGGGCAUUAA   446

2.5 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
AK107543.1
ncRNA:23   CUCAGUAGACACUGCCCGUAGUU   1
  |||||||||*||||||||*||||
targets:1585   GAGUCAUCUAUGACGGGCCUCAA   1607

2.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget
XM_015768179.1
ncRNA:23   CU--CAGUAGACACUGCCCGUAGUU   1
  ||--||**|||||||||||||||||
targets:426   GAACGUACUCUGUGACGGGCAUCAA   450

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277277 (LOC107277277), mRNA uncharacterized LOC107277277(LOC107277277) coding protein psRNATarget