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BaseInfo

ncRNA ID novel_zma_miR11109
Species Zea mays
Class miRNA
Genome position Chr7:112151907-112152036 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 107 - AAAAAACGGACGGAAUAAGCCCUC - 130
Stem-loop(if miRNA) --AA             U   -   -   ---     UU   ---  CCGUUUCCAUAUUUUUCGUAAA
    AAAACGGACGGAA AAG CCC UCU   CCCGU  CUG   CC                      U
    ||||||||||||| ||| ||| |||   |||||  |||   ||                      A
    UUUUGCCUGCCUU UUU GGG AGG   GGGCA  GAC   AG                      C
CAAC             U   A   C   GUU     -U   AAA  AUGUAAACUGGGCUGGCAAAGG
Stem-loop sequence AAAAAACGGACGGAAUAAGCCCUCUCCCGUUUCUGCCCCGUUUCCAUAUUUUUCGUAAAUACGGAAACGGUCGGGUCAAAUGUAGAAAACAGUACGGGUUGGGACGGGAUUUUUUCCGUCCGUUUUCAAC