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BaseInfo

ncRNA ID novel_zma_miR11092
Species Zea mays
Class miRNA
Genome position Chr7:151099594-151099643 [-]
Reference genome RefGen_v4
Source SRR5100248;SRR5100255
Length 24
Mature sequence(if miRNA) 27 - AGAAUUCAUGGUCAGUCAGUAGCG - 50
Stem-loop(if miRNA) --A      A  GU A    -    C
   GAAUUC UG  C GUCA GUAG G
   |||||| ||  | |||| ||||
   CUUAGG AU  G CGGU CAUU A
GGA      -  UG A    G    C
Stem-loop sequence AGAAUUCAUGGUCAGUCAGUAGCGACUUACGUGGCAGGUUAGGAUUCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU953088.1
ncRNA:24   GCGAUGACUGACUGGUACUUAAGA   1
  ||||||||*|||=|||||||||||
targets:569   CGCUACUGUCUGGCCAUGAAUUCU   592

2.5 Zea mays clone 1381669 mRNA sequence NA coding protein psRNATarget
XM_020551741.1
ncRNA:24   GCGAUGACUGACUGGUACUUAAGA   1
  ||||||||*|||=|||||||||||
targets:617   CGCUACUGUCUGGCCAUGAAUUCU   640

2.5 PREDICTED: Zea mays uncharacterized LOC100533130 (LOC100533130), transcript variant X3, mRNA NA coding protein psRNATarget