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BaseInfo

ncRNA ID	novel_zma_miR11086
Species	Zea mays
Class	miRNA
Genome position	Chr7:167314003-167314046 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	1 - UGACUAGCAAGGGAUUUAAUC - 21
Stem-loop(if miRNA)	--           C   U   A   UUAAAUCCCUU CUA UUA U   ||||||||||| ||| |||   AAUUUAGGGAA GAU AGU U CU           C   C   U
Stem-loop sequence	UUAAAUCCCUUCCUAUUUAAUUUUGACUAGCAAGGGAUUUAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY111895.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   |||||||||=||||||||||| targets:217   GAUUAAAUCUCUUGCUAGUCA   237 Target Full Sequence	1.5	Zea mays CL41465_1 mRNA sequence	NA	coding protein	psRNATarget
EU947542.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   *||||||||=||||||||||| targets:600   AAUUAAAUCUCUUGCUAGUCA   620 Target Full Sequence	1.5	Zea mays clone 346776 mRNA sequence	NA	coding protein	psRNATarget
XM_008680078.2	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   |||||||||||||*||||||| targets:3142   GAUUAAAUCCCUUUCUAGUCA   3162 Target Full Sequence	1.5	PREDICTED: Zea mays transcription factor GTE9 (LOC103653114), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008680079.2	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   |||||||||||||*||||||| targets:2803   GAUUAAAUCCCUUUCUAGUCA   2823 Target Full Sequence	1.5	PREDICTED: Zea mays transcription factor GTE9 (LOC103653114), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008680080.2	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   |||||||||||||*||||||| targets:2803   GAUUAAAUCCCUUUCUAGUCA   2823 Target Full Sequence	1.5	PREDICTED: Zea mays transcription factor GTE9 (LOC103653114), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008670947.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   |||||||||||||*||||||| targets:608   GAUUAAAUCCCUUCCUAGUCA   628 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103646219 (LOC103646219), mRNA	NA	coding protein	psRNATarget
XM_008678815.2	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   *||*|||||=||||||||||| targets:2004   AAUCAAAUCUCUUGCUAGUCA   2024 Target Full Sequence	2.5	PREDICTED: Zea mays protein kinase superfamily protein (LOC100277943), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001151382.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   *||*|||||=||||||||||| targets:1963   AAUCAAAUCUCUUGCUAGUCA   1983 Target Full Sequence	2.5	Zea mays protein kinase superfamily protein (LOC100277943), mRNA	NA	coding protein	psRNATarget
EU971308.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   *||*|||||=||||||||||| targets:1963   AAUCAAAUCUCUUGCUAGUCA   1983 Target Full Sequence	2.5	Zea mays clone 361878 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT066634.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   *||*|||||=||||||||||| targets:1955   AAUCAAAUCUCUUGCUAGUCA   1975 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0041F01 mRNA, complete cds	NA	coding protein	psRNATarget
BT086167.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   *||*|||||=||||||||||| targets:1912   AAUCAAAUCUCUUGCUAGUCA   1932 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0124D14 mRNA, complete cds	NA	coding protein	psRNATarget
BT086288.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   *||*|||||=||||||||||| targets:1912   AAUCAAAUCUCUUGCUAGUCA   1932 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0145E05 mRNA, complete cds	NA	coding protein	psRNATarget
EU942467.1	ncRNA:21   CUAAUUUAGGGAACGAUCAGU   1   *||*|||||=||||||||||| targets:345   AAUCAAAUCUCUUGCUAGUCA   365 Target Full Sequence	2.5	Zea mays clone 1506212 mRNA sequence	NA	coding protein	psRNATarget