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BaseInfo

ncRNA ID novel_zma_miR11084
Species Zea mays
Class miRNA
Genome position Chr7:179673483-179673602 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 21
Mature sequence(if miRNA) 100 - ACAAUUAUAGAUACAUGAGUG - 120
Stem-loop(if miRNA) --            C     C       G      C      UG       ------     A
  CUCGUGUGUCUA AAUUG UGUUAAA GCAGAC UAGUGC  GGGGCUC      CCCAC U
  |||||||||||| ||||| ||||||| |||||| ||||||  |||||||      |||||
  GAGUACAUAGAU UUAAC AUAAUUU CGUCUG GUCACG  CUCCGAG      GGGUG G
GU            A     A       G      U      GU       ACUCUA     A
Stem-loop sequence CUCGUGUGUCUACAAUUGCUGUUAAAGGCAGACCUAGUGCUGGGGGCUCCCCACAUGAGUGGGAUCUCAGAGCCUCUGGCACUGUGUCUGCGUUUAAUAACAAUUAUAGAUACAUGAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT035236.1
ncRNA:21   GUGAGUACAUAGAUAUUAACA   1
  =|=|**|||||||||||||||
targets:1768   UAUUGCUGUAUCUAUAAUUGU   1788

3.0 Zea mays full-length cDNA clone ZM_BFb0047E10 mRNA, complete cds NA coding protein psRNATarget