ncRNA ID | novel_zma_miR11084 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:179673483-179673602 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 21 |
Mature sequence(if miRNA) | 100 - ACAAUUAUAGAUACAUGAGUG - 120 |
Stem-loop(if miRNA) |
--            C     C       G      C      UG       ------     A   CUCGUGUGUCUA AAUUG UGUUAAA GCAGAC UAGUGC  GGGGCUC      CCCAC U   |||||||||||| ||||| ||||||| |||||| ||||||  |||||||      |||||   GAGUACAUAGAU UUAAC AUAAUUU CGUCUG GUCACG  CUCCGAG      GGGUG G GU            A     A       G      U      GU       ACUCUA     A |
Stem-loop sequence | CUCGUGUGUCUACAAUUGCUGUUAAAGGCAGACCUAGUGCUGGGGGCUCCCCACAUGAGUGGGAUCUCAGAGCCUCUGGCACUGUGUCUGCGUUUAAUAACAAUUAUAGAUACAUGAGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT035236.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0047E10 mRNA, complete cds | NA | coding protein | psRNATarget |