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BaseInfo

ncRNA ID	novel_zma_miR11082
Species	Zea mays
Class	miRNA
Genome position	Chr7:175750786-175750883 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	25
Mature sequence(if miRNA)	1 - ACCGGACAGUGAACAGUAACAUAUC - 25
Stem-loop(if miRNA)	--  C          C        A    ----  UG  A   -U -    U   AC GGACAGUGAA AGUAACAU UCUG    AU  AC GUU  C CUUC C   || |||||||||| |||||||| ||||    ||  || |||  | ||||   UG CCUGUCACUU UCAUUGUA AGGU    UG  UG CGA  G GAAG U CG  U          A        C    CACG  GU  C   UC A    G
Stem-loop sequence	ACCGGACAGUGAACAGUAACAUAUCUGAUUGACAGUUUCCUUCUCUGGAAGAGCUAGCCGUUGGUGCACUGGACAUGUUACUAUUCACUGUCCUGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001349964.1	ncRNA:25   CUAUACAAUGACAAGUGACAGGCCA   1   |||**|||||||||||||||||||| targets:2971   GAUCCGUUACUGUUCACUGUCCGGU   2995 Target Full Sequence	0.0	Zea mays uncharacterized LOC100278112 (IDP592), mRNA	NA	coding protein	psRNATarget
AY108692.1	ncRNA:25   CUAUACAAUGACAAGUGACAGGCCA   1   *****||||||*||||||||||*|| targets:167   ACACAGUUACUAUUCACUGUCCUGU   191 Target Full Sequence	2.5	Zea mays PCO083146 mRNA sequence	NA	coding protein	psRNATarget
JB170451.1	ncRNA:19   AAUGACAAGUGACAGGCCA   1   **||||||||||||||||| targets:1   GCACUGUUCACUGUCCGGU   19 Target Full Sequence	2.0	Sequence 8115 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242120.1	ncRNA:19   AAUGACAAGUGACAGGCCA   1   **||||||||||||||||| targets:1   GCACUGUUCACUGUCCGGU   19 Target Full Sequence	2.0	Sequence 8115 from Patent EP2985353	NA	coding protein	psRNATarget
HI409990.1	ncRNA:19   AAUGACAAGUGACAGGCCA   1   **||||||||||||||||| targets:1   GCACUGUUCACUGUCCGGU   19 Target Full Sequence	2.0	Sequence 8115 from Patent EP2074227	NA	coding protein	psRNATarget