| ncRNA ID | novel_zma_miR11080 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr1:79500875-79501092 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR5100248 |
| Length | 22 |
| Mature sequence(if miRNA) | 197 - ACCGGCUCACCAUCGUUUGGCC - 218 |
| Stem-loop(if miRNA) |
-- A UG A G G G G U CCAGACGAUGGUGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUUUAAAGC CCCC GCUUCAU UGUGCGCUUCUCUUCUCUUA GU GG UGCUAAG G ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| || || ||||||| GGUUUGCUACCACUCGGCCACAUGA ACAGGCCUACACACCAGUGUUUUAAAUUUCG GGGG CGAAGUA ACACGUGAAGAGAAGAGAAU CA CC AUGAUUC A CC G GU C G A G G U |
| Stem-loop sequence | CCAGACGAUGGUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCACAAAAUUUAAAGCUGCCCCAGCUUCAUGUGUGCGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGUGCACAGAUGAAGCCGGGGUGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACACCGGCUCACCAUCGUUUGGCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020538582.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020538581.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |