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BaseInfo

ncRNA ID novel_zma_miR11076
Species Zea mays
Class miRNA
Genome position Chr7:140307273-140307391 [+]
Reference genome RefGen_v4
Source SRR5100248;SRR2089698
Length 25
Mature sequence(if miRNA) 1 - AAGGGUAGGAGAGUAAAAUAUCACU - 25
Stem-loop(if miRNA) --AAG        AG        C    U A     C      GCUA      A   UCC
     GGUAGGAG  UAAAAUAU ACUU G GAUUA AAAUAA    AAAUAA CUA   A
     ||||||||  |||||||| |||| | ||||| ||||||    |||||| |||
     CUAUCCUC  AUUUUAUA UGAA C CUGAU UUUAUU    UUUAUU GAU   U
CCUUA        CU        A    C -     A      AAAC      C   CAU
Stem-loop sequence AAGGGUAGGAGAGUAAAAUAUCACUUUGAGAUUACAAAUAAGCUAAAAUAAACUAUCCAUUACUAGCUUAUUUCAAAUUAUUUAUAGUCCCAAGUAAUAUUUUAUCCUCCUAUCAUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU965413.1
ncRNA:25   UCACUAUAAAAUGAGAGGAUGGGAA   1
  **|||||||||||||||||||*|||
targets:356   UAUGAUAUUUUACUCUCCUACACUU   380

1.5 Zea mays clone 285855 mRNA sequence NA coding protein psRNATarget