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BaseInfo

ncRNA ID novel_zma_miR11075
Species Zea mays
Class miRNA
Genome position Chr7:138353711-138353775 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 23
Mature sequence(if miRNA) 1 - CUCGGCGUUAUAGGCUAUGGCGC - 23
Stem-loop(if miRNA) --        UA   G             G A
  CUCGGCGU  UAG CUAUGGCGCCGAG U A
  ||||||||  ||| ||||||||||||| | C
  GAGCCGCA  AUC GGUACCGCGGCUC A A
UC        GC   G             G C
Stem-loop sequence CUCGGCGUUAUAGGCUAUGGCGCCGAGGUAACACAGCUCGGCGCCAUGGGCUACGACGCCGAGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008666663.2
ncRNA:23   CGCGGUAUCGGAUAUUGCGGCUC   1
  |||||||||*||||=||||||||
targets:906   GCGCCAUAGGCUAUGACGCCGAG   928

2.5 PREDICTED: Zea mays hypothetical protein (LOC103643463), mRNA NA coding protein psRNATarget
BT068330.1
ncRNA:23   CGCGGUAUCGGAUAUUGCGGCUC   1
  |||||*||||||||=||||||||
targets:613   GCGCCUUAGCCUAUGACGCCGAG   635

2.5 Zea mays full-length cDNA clone ZM_BFb0107A05 mRNA, complete cds NA coding protein psRNATarget