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BaseInfo

ncRNA ID novel_zma_miR11068
Species Zea mays
Class miRNA
Genome position Chr7:122537273-122537347 [+]
Reference genome RefGen_v4
Source SRR5100248;SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AAACUGUAACGCCCUGAAUUUGGG - 24
Stem-loop(if miRNA) --AAACU        C         -   U   UUUUUU
       GUAACGCC UGAAUUUGG GGG AGA      U
       |||||||| ||||||||| ||| |||
       CAUUGCGG ACUUAAACC CUC UCU      C
CCUUUCU        -         A   -   UUUCUU
Stem-loop sequence AAACUGUAACGCCCUGAAUUUGGGGGUAGAUUUUUUUCUUCUUUUCUCUCACCAAAUUCAGGCGUUACUCUUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539096.1
ncRNA:24   GGGUUUAAGUCCCGCAAUGUCAAA   1
  |**|=|||||*||||||||||*||
targets:788   CAGAGAUUCAUGGCGUUACAGAUU   811

2.5 PREDICTED: Zea mays AP3-complex subunit beta-A (LOC100383432), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001351147.1
ncRNA:24   GGGUUUAAGUCCCGCAAUGUCAAA   1
  |**|=|||||*||||||||||*||
targets:966   CAGAGAUUCAUGGCGUUACAGAUU   989

2.5 Zea mays AP3-complex subunit beta-A (LOC100383432), mRNA NA coding protein psRNATarget