ncRNA ID | novel_zma_miR11053 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:46640979-46641094 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCCCGUCGGCCAGAGCAAAGGC - 24 |
Stem-loop(if miRNA) |
--AUC                     C    ----AG          AUGCC                CCCGUCGGCCAGAGCAAAGGC GGCG      AGUUAACUUA     CGUUGGCUGCG      ||||||||||||||||||||| ||||      ||||||||||     ||||||||||G      GGGCAGCCGGUCUCGUUUCCG CUGC      UCAAUUGAGU     GCAGCCGAUGG AUUGA                     A    CCUUAA          -----           |
Stem-loop sequence | AUCCCCGUCGGCCAGAGCAAAGGCCGGCGAGAGUUAACUUAAUGCCCGUUGGCUGCGGGGUAGCCGACGUGAGUUAACUAAUUCCCGUCAGCCUUUGCUCUGGCCGACGGGAGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008655791.1 |
|
1.5 | PREDICTED: Zea mays formin-like protein 5 (LOC103634209), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008682560.2 |
|
0.0 | PREDICTED: Zea mays submaxillary gland androgen-regulated protein 3A-like (LOC103655885), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008655952.2 |
|
2.0 | PREDICTED: Zea mays probable protein phosphatase 2C 31 (LOC103634426), mRNA | NA | coding protein | psRNATarget |