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BaseInfo

ncRNA ID novel_zma_miR11041
Species Zea mays
Class miRNA
Genome position Chr10:60220335-60220408 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - ACACUCGGUAAAGAAGCUCUUUGC - 24
Stem-loop(if miRNA) --A              G                UUA
   CACUCGGUAAAGAA CUCUUUGCUGAGUGUU   U
   |||||||||||||| ||||||||||||||||
   GUGAGCCGUUUUUU GAGAAACGGCUCACAG   U
UUC              G                UUU
Stem-loop sequence ACACUCGGUAAAGAAGCUCUUUGCUGAGUGUUUUAUUUUUGACACUCGGCAAAGAGGUUUUUUGCCGAGUGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658185.2
ncRNA:24   CGUUUCUCGAAGAAAUGGCUCACA   1
  |=|||||||||*||||||||||||
targets:1666   GUAAAGAGCUUGUUUACCGAGUGU   1689

1.5 PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA NA coding protein psRNATarget