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BaseInfo

ncRNA ID novel_zma_miR11029
Species Zea mays
Class miRNA
Genome position Chr6:99660368-99660438 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 22
Mature sequence(if miRNA) 50 - UCGGGCUGUUUCUCGAGUGCCU - 71
Stem-loop(if miRNA) -UC G      -     A   -C     CGUAA   C
   G GCUGUU UCUCG GUG  CUCUC     GGA C
   | |||||| ||||| |||  |||||     |||
   C UGACAA AGAGU CAC  GAGAG     CUU U
CAA G      U     C   CA     --UUG   G
Stem-loop sequence UCGGGCUGUUUCUCGAGUGCCUCUCCGUAAGGACCUGUUCGUUGAGAGACCACCUGAGAUAACAGUGCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542196.1
ncRNA:22   UCCGUGAGCUCUUUGUCGGGCU   1
  |||=||||||||||||*|||||
targets:1875   AGGUACUCGAGAAACAACCCGA   1896

2.5 PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X6, mRNA NA coding protein psRNATarget