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BaseInfo

ncRNA ID	novel_zma_miR11022
Species	Zea mays
Class	miRNA
Genome position	Chr6:111307449-111307648 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - GAGAAGAUCUGUGUAAAAAUUGGA - 24
Stem-loop(if miRNA)	--         UG      C   A          A  C     --CCAU     U              U            CCCAUAA    C     UAUUU   CAAUUUUUA  UAGAUC UCU UUAGAUAAAC AA AUACA      UUUUU GAAUUUUCUGAGAA UUUGAAUUUGGA       UUUA AUAAA     U   |||||||||  |||||| ||| |||||||||| || |||||      ||||| |||||||||||||| ||||||||||||       |||| |||||     A   GUUAAAAAU  GUCUAG AGA AAUCUAUUUG UU UAUGU      AAAGA CUUAAAAGAUUCUU AAACUUAGAUCU       AGAU UAUUU     G AG         GU      A   G          A  C     AUUUAU     U              U            -------    A     CAAGA
Stem-loop sequence	CAAUUUUUAUGUAGAUCCUCUAUUAGAUAAACAAACAUACACCAUUUUUUUGAAUUUUCUGAGAAUUUUGAAUUUGGACCCAUAAUUUACAUAAAUAUUUUAGAGAACUUUAUAUAGAUCUAGAUUCAAAUUUCUUAGAAAAUUCUAGAAAUAUUUAUGUAUCUUAGUUUAUCUAAGAGAAGAUCUGUGUAAAAAUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008667557.2	ncRNA:24   AGGUUAAAAAUGUGUCUAGAAGAG   1   ***=||*|||||||||||=||||| targets:4247   GAAGAUCUUUACACAGAUUUUCUC   4270 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547056.1	ncRNA:24   AGGUUAAAAAUGUGUCUAGAAGAG   1   ***=||*|||||||||||=||||| targets:4241   GAAGAUCUUUACACAGAUUUUCUC   4264 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_008667558.2	ncRNA:24   AGGUUAAAAAUGUGUCUAGAAGAG   1   ***=||*|||||||||||=||||| targets:4241   GAAGAUCUUUACACAGAUUUUCUC   4264 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547053.1	ncRNA:24   AGGUUAAAAAUGUGUCUAGAAGAG   1   ***=||*|||||||||||=||||| targets:4044   GAAGAUCUUUACACAGAUUUUCUC   4067 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547054.1	ncRNA:24   AGGUUAAAAAUGUGUCUAGAAGAG   1   ***=||*|||||||||||=||||| targets:3481   GAAGAUCUUUACACAGAUUUUCUC   3504 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020547055.1	ncRNA:24   AGGUUAAAAAUGUGUCUAGAAGAG   1   ***=||*|||||||||||=||||| targets:3449   GAAGAUCUUUACACAGAUUUUCUC   3472 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008667560.2	ncRNA:24   AGGUUAAAAAUGUGUCUAGAAGAG   1   ***=||*|||||||||||=||||| targets:4244   GAAGAUCUUUACACAGAUUUUCUC   4267 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020547057.1	ncRNA:24   AGGUUAAAAAUGUGUCUAGAAGAG   1   ***=||*|||||||||||=||||| targets:3092   GAAGAUCUUUACACAGAUUUUCUC   3115 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X9, mRNA	NA	coding protein	psRNATarget