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BaseInfo

ncRNA ID novel_zma_miR11005
Species Zea mays
Class miRNA
Genome position Chr6:157677949-157677988 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 20
Mature sequence(if miRNA) 21 - AAGAUUAGUGAGACAGCACC - 40
Stem-loop(if miRNA) --A       U        A
   AGAUUAG GAGACAGC C
   ||||||| |||||||| C
   UCUAAUU CUCUGUUG U
GAA       -        C
Stem-loop sequence AAGAUUAGUGAGACAGCACCUCGUUGUCUCUUAAUCUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008651530.2
ncRNA:20   CCACGACAGAGUGAUUAGAA   1
  ||||||||||||||||||||
targets:1495   GGUGCUGUCUCACUAAUCUU   1514

0.0 PREDICTED: Zea mays TOM1-like protein 2 (LOC103630481), transcript variant X1, mRNA NA coding protein psRNATarget