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BaseInfo

ncRNA ID	novel_zma_miR11002
Species	Zea mays
Class	miRNA
Genome position	Chr6:21570424-21570474 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	28 - AGGACGCAUGUGCCCUGAGGCGCC - 51
Stem-loop(if miRNA)	--U    G  U  C  -       GG    GUCU AG GC CA GCGUCUU  A    |||| || || || |||||||    CGGA UC CG GU CGCAGGA  U CCG    G  C  U  A       AU
Stem-loop sequence	UGUCUGAGUGCCCAGCGUCUUGGAUUAAGGACGCAUGUGCCCUGAGGCGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542781.1	ncRNA:24   CCGCGGAGUCCCGUGUACGCAGGA   1   ||=|=||*|||||||||||||||| targets:2749   GGUGUCUGAGGGCACAUGCGUCCU   2772 Target Full Sequence	1.0	PREDICTED: Zea mays phytanoyl-CoA dioxygenase 2 (LOC103635236), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU973405.1	ncRNA:24   CCGCGGAGUCCCGUGUACGCAGGA   1   |||*|||*|||||||||||||||| targets:671   GGCACCUGAGGGCACAUGCGUCCU   694 Target Full Sequence	1.0	Zea mays clone 398173 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT019125.1	ncRNA:24   CCGCGGAGUCCCGUGUACGCAGGA   1   ||=**||*|||||||||||||||| targets:359   GGUAGCUGAGGGCACAUGCGUCCU   382 Target Full Sequence	1.0	Zea mays clone Contig739.F mRNA sequence	NA	coding protein	psRNATarget
EU969222.1	ncRNA:24   CCGCGGAGUCCCGUGUACGCAGGA   1   |*=**||*|||||||||||||||| targets:586   GUUAGCUGAGGGCACAUGCGUCCU   609 Target Full Sequence	1.0	Zea mays clone 327027 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008661405.2	ncRNA:24   CCGCGGAGUCCCGUGUACGCAGGA   1   |*=**||*|||||||||||||||| targets:713   GUUAGCUGAGGGCACAUGCGUCCU   736 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103638507 (LOC103638507), mRNA	NA	coding protein	psRNATarget