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BaseInfo

ncRNA ID	novel_zma_miR11000
Species	Zea mays
Class	miRNA
Genome position	Chr6:170780372-170780552 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - AAACACGAACUCUGUCGGUCACCC - 24
Stem-loop(if miRNA)	--         -   GC                -      G  G   GAAA                  G            C    GCCU   GUGACCGAC GAG  CGUGUUUAUGACAAGA CAUGUG UC UGC    UUUCGGCAGCAUAACCCC CUGUUCUCCAAU GCAC    A   ||||||||| |||  |||||||||||||||| |||||| || |||    |||||||||||||||||| |||||||||||| ||||    A   CACUGGCUG CUC  GCACAAAUACUGUUUU GUACAC AG ACG    AAAGCCGUCGUAUUGGGG GACAAGAGGUUA CGUG    A CC         U   AA                C      G  G   AAUC                  A            A    GUAA
Stem-loop sequence	GUGACCGACGAGGCCGUGUUUAUGACAAGACAUGUGGUCGUGCGAAAUUUCGGCAGCAUAACCCCGCUGUUCUCCAAUCGCACGCCUAAAAAUGGUGCAAUUGGAGAACAGAGGGGUUAUGCUGCCGAAACUAAGCAGGAGCACAUGCUUUUGUCAUAAACACGAACUCUGUCGGUCACCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020548028.1	ncRNA:24   CCC--ACUGGCUGUCUCAAGCACAAA   1   *||--|||||||=|*||||||||||| targets:78   AGGAUUGACCGAUAAAGUUCGUGUUU   103 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103625748 (LOC103625748), mRNA	NA	coding protein	psRNATarget