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BaseInfo

ncRNA ID	novel_zma_miR10992
Species	Zea mays
Class	miRNA
Genome position	Chr6:158365352-158365453 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	79 - AACGGAGGAAGUAUAUGUUUUAUG - 102
Stem-loop(if miRNA)	----UAAA       C                                 CAA         AUAUACU CCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUG   U         ||||||| |||||||||||||||||||||||||||||||||         UAUAUGA GGAGGCAAAGAAAAAUAAACAGCGACCUAUCAC   U GUAUUUUG       A                                 AUU
Stem-loop sequence	UAAAAUAUACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUGCAAUUUUACACUAUCCAGCGACAAAUAAAAAGAAACGGAGGAAGUAUAUGUUUUAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008651543.2	ncRNA:24   GUAUUUUGUAUAUGAAGGAGGCAA   1   |||||||||||||||||||||||| targets:2485   CAUAAAACAUAUACUUCCUCCGUU   2508 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008651544.2	ncRNA:24   GUAUUUUGUAUAUGAAGGAGGCAA   1   |||||||||||||||||||||||| targets:1344   CAUAAAACAUAUACUUCCUCCGUU   1367 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008667413.1	ncRNA:24   GUAU------UUUGUAUAUGAAGGAGGCAA   1   =|||------|||||||||||*|||||||| targets:1321   UAUAGCAAAUAAACAUAUACUCCCUCCGUU   1350 Target Full Sequence	1.5	PREDICTED: Zea mays polygalacturonase (LOC103644217), mRNA	NA	coding protein	psRNATarget
HI403369.1	ncRNA:23   UAUUUUGUAUAUGAAGGAGGCAA   1   **|||||*||||||*|||||||| targets:1   UCAAAACUUAUACUCCCUCCGUU   23 Target Full Sequence	2.5	Sequence 1494 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235499.1	ncRNA:23   UAUUUUGUAUAUGAAGGAGGCAA   1   **|||||*||||||*|||||||| targets:1   UCAAAACUUAUACUCCCUCCGUU   23 Target Full Sequence	2.5	Sequence 1494 from Patent EP2985353	NA	coding protein	psRNATarget
JB163830.1	ncRNA:23   UAUUUUGUAUAUGAAGGAGGCAA   1   **|||||*||||||*|||||||| targets:1   UCAAAACUUAUACUCCCUCCGUU   23 Target Full Sequence	2.5	Sequence 1494 from Patent EP2559767	NA	coding protein	psRNATarget