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BaseInfo

ncRNA ID novel_zma_miR10969
Species Zea mays
Class miRNA
Genome position Chr6:76809639-76809724 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 25
Mature sequence(if miRNA) 62 - AUCAAACUGGAGAAACCUAACGGGA - 86
Stem-loop(if miRNA) --   --     CU    A      UUUGU    C  -C     U
  CCG  AGGUU  UUCG UUUGGU     UAGU AC  CUUCC A
  |||  |||||  |||| ||||||     |||| ||  |||||
  GGC  UCCAA  AGGU AAACUA     GUCA UG  GAGGG A
AG   AA     AG    C      UUUGU    -  AA     G
Stem-loop sequence CCGAGGUUCUUUCGAUUUGGUUUUGUUAGUCACCCUUCCUAAGGGGAGAAGUACUGUGUUUAUCAAACUGGAGAAACCUAACGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542196.1
ncRNA:25   AGGGCAAUCCAAAGAGGUCAAACUA   1
  *|||*||||||||||||||||||||
targets:1619   GCCCAUUAGGUUUCUCCAGUUUGAU   1643

0.0 PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X6, mRNA NA coding protein psRNATarget