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BaseInfo

ncRNA ID novel_zma_miR10956
Species Zea mays
Class miRNA
Genome position Chr10:32516960-32517035 [+]
Reference genome RefGen_v4
Source SRR5100248;SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AGAUUGUAACACCCUGAAUUUGGG - 24
Stem-loop(if miRNA) --   -UU        C          -    UAAAAUU
  AGA   GUAACACC UGAAUUUGGG GGUA       U
  |||   |||||||| |||||||||| ||||       C
  UCU   CAUUGUGG ACUUAAACCU CUAU       U
UC   UCU        -          A    UAUUCUU
Stem-loop sequence AGAUUGUAACACCCUGAAUUUGGGGGUAUAAAAUUUCUUUCUUAUUAUCAUCCAAAUUCAGGUGUUACUCUUCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008669578.2
ncRNA:24   GGGUUU-AAGUCCCACAAUGUUAGA   1
  ||=|||-|||||||||||||||||*
targets:2286   CCUAAAAUUCAGGGUGUUACAAUCG   2310

3.0 PREDICTED: Zea mays uncharacterized LOC100279556 (LOC100279556), transcript variant X1, mRNA NA coding protein psRNATarget