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BaseInfo

ncRNA ID novel_zma_miR10936
Species Zea mays
Class miRNA
Genome position Chr5:96274952-96275019 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - GACCCGAUCUGCUCGACUAAUCGU - 24
Stem-loop(if miRNA) --            -----UA      UC G    C
  GAUUAGUCGGGC       GUCGGU  U UUAG A
  ||||||||||||       ||||||  | |||| C
  CUAAUCAGCUCG       CAGCCG  G GAUC G
UG            UCUAGCC      GA G    A
Stem-loop sequence GAUUAGUCGGGCUAGUCGGUUCUGUUAGCACGACUAGGGAGGCCGACCCGAUCUGCUCGACUAAUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538386.1
ncRNA:24   UGCUAAUCAGCUCGUCUAGCCCAG   1
  ||*|||||||||||||||||||*|
targets:1207   ACAAUUAGUCGAGCAGAUCGGGCC   1230

1.5 PREDICTED: Zea mays anaphase-promoting complex subunit 2 (LOC103626410), transcript variant X3, mRNA NA coding protein psRNATarget