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BaseInfo

ncRNA ID novel_zma_miR10927
Species Zea mays
Class miRNA
Genome position Chr5:29654828-29654872 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 22
Mature sequence(if miRNA) 1 - CUAAAUACGGAAGCUAAAACUC - 22
Stem-loop(if miRNA) --C      C           C
   UAAAUA GGAAGCUAAAA U
   |||||| ||||||||||| C
   AUUUAU CCUUUGAUUUU U
ACA      C           A
Stem-loop sequence CUAAAUACGGAAGCUAAAACUCUAUUUUAGUUUCCCUAUUUAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008651702.2
ncRNA:22   CUCAAAAUCGAAGGCAUAAAUC   1
  |||||*|||=||||||||||||
targets:540   GAGUUAUAGUUUCCGUAUUUAG   561

2.5 PREDICTED: Zea mays type IV inositol polyphosphate 5-phosphatase 3 (LOC103630655), transcript variant X3, mRNA NA coding protein psRNATarget
JB163910.1
ncRNA:22   CUCAAAAUCGAAGGCAUAAAUC   1
  ||||||||*|||||*|||||||
targets:53   GAGUUUUAACUUCCUUAUUUAG   74

2.5 Sequence 1574 from Patent EP2559767 NA coding protein psRNATarget
HI403449.1
ncRNA:22   CUCAAAAUCGAAGGCAUAAAUC   1
  ||||||||*|||||*|||||||
targets:53   GAGUUUUAACUUCCUUAUUUAG   74

2.5 Sequence 1574 from Patent EP2074227 NA coding protein psRNATarget
LQ235579.1
ncRNA:22   CUCAAAAUCGAAGGCAUAAAUC   1
  ||||||||*|||||*|||||||
targets:53   GAGUUUUAACUUCCUUAUUUAG   74

2.5 Sequence 1574 from Patent EP2985353 NA coding protein psRNATarget