ncRNA ID | novel_zma_miR10920 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:164788456-164788539 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 21 |
Mature sequence(if miRNA) | 64 - UCUGUCCAGAUUGUAUAAUUC - 84 |
Stem-loop(if miRNA) |
--UC    C                          U   CAA     UGUC AGAUUGUAUAAUUCAACAAAUUUUGA CUA   A     |||| |||||||||||||||||||||||||| |||     AUAG UCUAAUAUAUUAGGUUGUUUAAAACU GAU   U UUAU    A                          U   UAU |
Stem-loop sequence | UCUGUCCAGAUUGUAUAAUUCAACAAAUUUUGAUCUACAAAUUAUUAGUUCAAAAUUUGUUGGAUUAUAUAAUCUAGAUAUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008682894.2 |
|
1.5 | PREDICTED: Zea mays transducin family protein / WD-40 repeat family protein (si618080f12(37)), transcript variant X5, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008681303.2 |
|
2.5 | PREDICTED: Zea mays F-box protein At-B (LOC103654475), mRNA | NA | coding protein | psRNATarget | |||||||||
EU977031.1 |
|
2.5 | Zea mays clone 996758 mRNA sequence | NA | coding protein | psRNATarget |