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BaseInfo

ncRNA ID novel_zma_miR10919
Species Zea mays
Class miRNA
Genome position Chr10:11439240-11439364 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 22
Mature sequence(if miRNA) 104 - UAUUUCGAGAAAGUUGUGAGAC - 125
Stem-loop(if miRNA) --UA                              U                  CA      CA
    UUUCGAGAAAGUUGUGAGACAGUAUGUGUA AAACCUAAGAGAACUACA  UGAAAU  U
    |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||
    AAAGCUCUUUCAACACUCUGUCAUACACAU UUUGGAUUCUCUUGAUGU  ACUUUG  A
UUAC                              C                  -A      AG
Stem-loop sequence UAUUUCGAGAAAGUUGUGAGACAGUAUGUGUAUAAACCUAAGAGAACUACACAUGAAAUCAUAGAGUUUCAAUGUAGUUCUCUUAGGUUUCUACACAUACUGUCUCACAACUUUCUCGAAACAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235339.1
ncRNA:22   CAGAGUGUUGAAAGAGCUUUAU   1
  *|*|||||||||||||||||*|
targets:167   AUGUCACAACUUUCUCGAAACA   188

1.5 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
JB163670.1
ncRNA:22   CAGAGUGUUGAAAGAGCUUUAU   1
  *|*|||||||||||||||||*|
targets:167   AUGUCACAACUUUCUCGAAACA   188

1.5 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget
HI403209.1
ncRNA:22   CAGAGUGUUGAAAGAGCUUUAU   1
  *|*|||||||||||||||||*|
targets:167   AUGUCACAACUUUCUCGAAACA   188

1.5 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget