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BaseInfo

ncRNA ID novel_zma_miR10909
Species Zea mays
Class miRNA
Genome position Chr5:191192154-191192312 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AUUUCGGAGAUGACCGUCGGGUGA - 24
Stem-loop(if miRNA) --  G    C  -      A    ---    --    A   -   GCCAG  UCUCA     A   G     AAC      -   AUG
  AC UGGC GG CGUUUU GAGG   CAGC  GCCG GUG AUA     CU     AGUUA UUU AGGAA   GGCCGA GUG   A
  || |||| || |||||| ||||   ||||  |||| ||| |||     ||     ||||| ||| |||||   |||||| |||   G
  UG GCUG CC GUAGAG CUUU   GUCG  CGGU CAC UAU     GA     UCAAU AAG UUCUU   UCGGCU CAC   G
AG  G    -  A      G    AGG    UA    G   C   ----A  --UUG     A   G     ---      A   GGU
Stem-loop sequence ACGUGGCCGGCGUUUUAGAGGCAGCGCCGAGUGAUAGCCAGCUUCUCAAGUUAAUUUGAGGAAAACGGCCGAGUGAUGAGGUGGCACAUCGGCUUUCUUGGAAAUAACUGUUAGAUAUCCACGUGGCAUGCUGGGAUUUCGGAGAUGACCGUCGGGUGA