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BaseInfo

ncRNA ID	novel_zma_miR10906
Species	Zea mays
Class	miRNA
Genome position	Chr5:205337653-205337851 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - AUCAGACUGUCCGGUGUGCCAACG - 24
Stem-loop(if miRNA)	-UC             U   C           A    G          AC    A   A U        --CACC  -   A U AACG    -AC    CA    UGGCACACCGGAC GUC GGUGUGCCACC GACA UGUCCGGUGC  CACC GAC G GUCCGGUG      AG GGA C C    CUGA   UCCU  C    ||||||||||||| ||| ||||||||||| |||| ||||||||||  |||| ||| | ||||||||      || ||| | |    ||||   ||||  C    ACCGUGUGGCCUG CAG CUACACGGUGG CUGU ACAGGCCACG  GUGG CUG C CAGGCCAC      UC CCU G G    GACU   AGGG  U GCA             U   A           C    G          GA    C   - -        UUAAUA  A   C C -GGA    AAA    CU
Stem-loop sequence	UCUGGCACACCGGACUGUCCGGUGUGCCACCAGACAGUGUCCGGUGCACCACCAGACAGUGUCCGGUGCACCAGGGAACUCAACGCUGAACUCCUCACCUUCGGGAAAAUCAGAGGGCGCUCCACUAUAAUUCACCGGACCGUCCGGUGAGGCACCGGACAGUGUCCGGUGGCACAUCAGACUGUCCGGUGUGCCAACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170463.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   |||||||*||||||||||||||=| targets:65   CGUUGGCUCACCGGACAGUCUGGU   88 Target Full Sequence	2.5	Sequence 8127 from Patent EP2559767	NA	coding protein	psRNATarget
HI410002.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   |||||||*||||||||||||||=| targets:65   CGUUGGCUCACCGGACAGUCUGGU   88 Target Full Sequence	2.5	Sequence 8127 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242132.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   |||||||*||||||||||||||=| targets:65   CGUUGGCUCACCGGACAGUCUGGU   88 Target Full Sequence	2.5	Sequence 8127 from Patent EP2985353	NA	coding protein	psRNATarget
HI409932.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   |**|||||||||||||||||||=| targets:9   CUGUGGCACACCGGACAGUCUGGU   32 Target Full Sequence	1.5	Sequence 8057 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242062.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   |**|||||||||||||||||||=| targets:9   CUGUGGCACACCGGACAGUCUGGU   32 Target Full Sequence	1.5	Sequence 8057 from Patent EP2985353	NA	coding protein	psRNATarget
JB170393.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   |**|||||||||||||||||||=| targets:9   CUGUGGCACACCGGACAGUCUGGU   32 Target Full Sequence	1.5	Sequence 8057 from Patent EP2559767	NA	coding protein	psRNATarget
EU940974.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   |****|||||||||||||||||=| targets:2768   CCGGUGCACACCGGACAGUCUGGU   2791 Target Full Sequence	1.5	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
HI406592.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   *|**||==|||||||||||||||| targets:3   AGGAGGUGCACCGGACAGUCUGAU   26 Target Full Sequence	2.0	Sequence 4717 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238722.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   *|**||==|||||||||||||||| targets:3   AGGAGGUGCACCGGACAGUCUGAU   26 Target Full Sequence	2.0	Sequence 4717 from Patent EP2985353	NA	coding protein	psRNATarget
JB167053.1	ncRNA:24   GCAACCGUGUGGCCUGUCAGACUA   1   *|**||==|||||||||||||||| targets:3   AGGAGGUGCACCGGACAGUCUGAU   26 Target Full Sequence	2.0	Sequence 4717 from Patent EP2559767	NA	coding protein	psRNATarget