ncRNA ID | osa-miRf10687-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - GGUCACUGCUUGCCUUUGCAG - NA |
Stem-loop(if miRNA) |
           -   A              AG    ------------AU  UGGGUUACC UUCAUGACCAG GUC CUGCUUGCCUUUGC  UACC              UA         G ||||||||||| ||| ||||||||||||||  ||||              ||         U AGGUACUGGUC CAG GACGAACGGAAACG  AUGG              GG         G            U   C              AA    GAAAAGUAAGGAAG  AGUUAGACC |
Stem-loop sequence | UUCAUGACCAGGUCACUGCUUGCCUUUGCAGUACCAUUAUGGGUUACCGUGCCAGAUUGAGGGAAGGAAUGAAAAGGGUAAAGCAAAGGCAAGCAGCGACUCUGGUCAUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015771428.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group copper-transporting ATPase RAN1 (LOC4328448), transcript variant X2, mRNA | copper-transporting ATPase RAN1(LOC4328448) | coding protein | psRNATarget | |||||||||
XM_015771427.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group copper-transporting ATPase RAN1 (LOC4328448), transcript variant X1, mRNA | copper-transporting ATPase RAN1(LOC4328448) | coding protein | psRNATarget | |||||||||
XM_015788093.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group copper-transporting ATPase RAN1 (LOC4341778), mRNA | copper-transporting ATPase RAN1(LOC4341778) | coding protein | psRNATarget | |||||||||
AK241795.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065208E19, full insert sequence | NA | coding protein | psRNATarget |