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BaseInfo

ncRNA ID osa-miRf10687-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGUCACUGCUUGCCUUUGCAG - NA
Stem-loop(if miRNA)            -   A              AG    ------------AU  UGGGUUACC
UUCAUGACCAG GUC CUGCUUGCCUUUGC  UACC              UA         G
||||||||||| ||| ||||||||||||||  ||||              ||         U
AGGUACUGGUC CAG GACGAACGGAAACG  AUGG              GG         G
           U   C              AA    GAAAAGUAAGGAAG  AGUUAGACC
Stem-loop sequence UUCAUGACCAGGUCACUGCUUGCCUUUGCAGUACCAUUAUGGGUUACCGUGCCAGAUUGAGGGAAGGAAUGAAAAGGGUAAAGCAAAGGCAAGCAGCGACUCUGGUCAUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015771428.1
ncRNA:21   GACGUUUCCGUUCGUCACUGG   1
  |||||=|||||||||||||*|
targets:2116   CUGCAGAGGCAAGCAGUGAAC   2136

2.5 PREDICTED: Oryza sativa Japonica Group copper-transporting ATPase RAN1 (LOC4328448), transcript variant X2, mRNA copper-transporting ATPase RAN1(LOC4328448) coding protein psRNATarget
XM_015771427.1
ncRNA:21   GACGUUUCCGUUCGUCACUGG   1
  |||||=|||||||||||||*|
targets:2119   CUGCAGAGGCAAGCAGUGAAC   2139

2.5 PREDICTED: Oryza sativa Japonica Group copper-transporting ATPase RAN1 (LOC4328448), transcript variant X1, mRNA copper-transporting ATPase RAN1(LOC4328448) coding protein psRNATarget
XM_015788093.1
ncRNA:21   GACGUUUCCGUUCGUCACUGG   1
  |||||=|||||||||||||*|
targets:2136   CUGCAGAGGCAAGCAGUGAGC   2156

2.5 PREDICTED: Oryza sativa Japonica Group copper-transporting ATPase RAN1 (LOC4341778), mRNA copper-transporting ATPase RAN1(LOC4341778) coding protein psRNATarget
AK241795.1
ncRNA:21   GACGUUUCCGUUCGUCACUGG   1
  |||||=|||||||||||||*|
targets:2141   CUGCAGAGGCAAGCAGUGAGC   2161

2.5 Oryza sativa Japonica Group cDNA, clone: J065208E19, full insert sequence NA coding protein psRNATarget