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BaseInfo

ncRNA ID novel_zma_miR10895
Species Zea mays
Class miRNA
Genome position Chr5:205607948-205608052 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 22
Mature sequence(if miRNA) 84 - CUGGACAUGUCUGGUGUGCACC - 105
Stem-loop(if miRNA) --  UG         --C    GCGG    -A --AA    GAA   -  AAC  UC
  UG  CACCGGACA   CCAG    GCCC  G    GUCA   GCU CC   GG  A
  ||  |||||||||   ||||    ||||  |    ||||   ||| ||   ||  G
  AC  GUGGUCUGU   GGUC    CGGG  C    CAGU   UGA GG   CC  A
CC  GU         ACA    ---A    GG GGUG    -AG   C  CAA  UA
Stem-loop sequence UGUGCACCGGACACCCAGGCGGGCCCAGAAGUCAGAAGCUCCAACGGUCAGAAUCCAACGGCAGUGAUGACGUGGCGGGGGCACUGGACAUGUCUGGUGUGCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241848.1
ncRNA:22   CCACGUGUGGUCUGUACAGGUC   1
  ||||==||||||||||||||||
targets:1   GGUGUGCACCAGACAUGUCCAG   22

2.0 Sequence 7843 from Patent EP2985353 NA coding protein psRNATarget
HI409718.1
ncRNA:22   CCACGUGUGGUCUGUACAGGUC   1
  ||||==||||||||||||||||
targets:1   GGUGUGCACCAGACAUGUCCAG   22

2.0 Sequence 7843 from Patent EP2074227 NA coding protein psRNATarget
JB170179.1
ncRNA:22   CCACGUGUGGUCUGUACAGGUC   1
  ||||==||||||||||||||||
targets:1   GGUGUGCACCAGACAUGUCCAG   22

2.0 Sequence 7843 from Patent EP2559767 NA coding protein psRNATarget