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BaseInfo

ncRNA ID novel_zma_miR10888
Species Zea mays
Class miRNA
Genome position Chr5:178270647-178270817 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 26
Mature sequence(if miRNA) 146 - AAAUUAGUCCUUAGAAACCAAACACC - 171
Stem-loop(if miRNA) --                           CUCCCUCC        C    U    AC         C           U      
  UGUUUGGUUUCUAGGGACUAAUUUUUA        AUUUUAUU CAUU UAGU  CUAAAUUGC AGAUAUGGAAA UGAAAUA
  |||||||||||||||||||||||||||        |||||||| |||| ||||  ||||||||| ||||||||||| ||||||G
  ACAAACCAAAGAUUCCUGAUUAAAAAU        UAAAAUAA GUAA AUCA  GAUUUAACG UUUAUGCUUUU AUUUUGA
CC                           CAAGAAAA        A    C    GA         A           U      
Stem-loop sequence UGUUUGGUUUCUAGGGACUAAUUUUUACUCCCUCCAUUUUAUUCCAUUUUAGUACCUAAAUUGCCAGAUAUGGAAAUUGAAAUAGAGUUUUAUUUUUCGUAUUUAGCAAUUUAGAGACUACAAUGAAAUAAAAUAAAAGAACUAAAAAUUAGUCCUUAGAAACCAAACACC