ncRNA ID | novel_zma_miR10888 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:178270647-178270817 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 26 |
Mature sequence(if miRNA) | 146 - AAAUUAGUCCUUAGAAACCAAACACC - 171 |
Stem-loop(if miRNA) |
--                           CUCCCUCC        C    U    AC         C           U         UGUUUGGUUUCUAGGGACUAAUUUUUA        AUUUUAUU CAUU UAGU  CUAAAUUGC AGAUAUGGAAA UGAAAUA   |||||||||||||||||||||||||||        |||||||| |||| ||||  ||||||||| ||||||||||| ||||||G   ACAAACCAAAGAUUCCUGAUUAAAAAU        UAAAAUAA GUAA AUCA  GAUUUAACG UUUAUGCUUUU AUUUUGA CC                           CAAGAAAA        A    C    GA         A           U       |
Stem-loop sequence | UGUUUGGUUUCUAGGGACUAAUUUUUACUCCCUCCAUUUUAUUCCAUUUUAGUACCUAAAUUGCCAGAUAUGGAAAUUGAAAUAGAGUUUUAUUUUUCGUAUUUAGCAAUUUAGAGACUACAAUGAAAUAAAAUAAAAGAACUAAAAAUUAGUCCUUAGAAACCAAACACC |