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BaseInfo

ncRNA ID novel_zma_miR10882
Species Zea mays
Class miRNA
Genome position Chr5:155591881-155591967 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 21
Mature sequence(if miRNA) 1 - UUAAAUCUCCUCCGGGAUUCC - 21
Stem-loop(if miRNA) --        C      G    C UA       UG       GA
  UUAAAUCU CUCCGG AUUC C  GGGUUGA  GGAAAAU  G
  |||||||| |||||| |||| |  |||||||  |||||||
  AAUUUAGA GAGGCC UAAG G  UCUAACU  CUUUUUA  C
UG        A      -    A CC       CA       AU
Stem-loop sequence UUAAAUCUCCUCCGGGAUUCCCUAGGGUUGAUGGGAAAAUGAGCUAAUUUUUCACUCAAUCUCCGAGAAUCCGGAGAAGAUUUAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY108498.1
ncRNA:21   CCUUAGGGCCUCCUCUAAAUU   1
  ||||**|=|||||||||||||
targets:1918   GGAACACUGGAGGAGAUUUAA   1938

3.0 Zea mays PCO093951 mRNA sequence NA coding protein psRNATarget