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BaseInfo

ncRNA ID osa-miRf10685-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - AGCAGCGACUCUGGUCAUGGAA - NA
Stem-loop(if miRNA)        U         -   A              AG    ------------AU  UGGGUUACC
CUAAUUU CAUGACCAG GUC CUGCUUGCCUUUGC  UACC              UA         G
||||||| ||||||||| ||| ||||||||||||||  ||||              ||         U
GGUUAAG GUACUGGUC CAG GACGAACGGAAACG  AUGG              GG         G
       -         U   C              AA    GAAAAGUAAGGAAG  AGUUAGACC
Stem-loop sequence CUAAUUUUCAUGACCAGGUCACUGCUUGCCUUUGCAGUACCAUUAUGGGUUACCGUGCCAGAUUGAGGGAAGGAAUGAAAAGGGUAAAGCAAAGGCAAGCAGCGACUCUGGUCAUGGAAUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015773328.1
ncRNA:22   AAGGUACUGGUCUCAGCGACGA   1
  ||||||*||||||*||||||||
targets:402   UUCCAUUACCAGAAUCGCUGCU   423

2.5 PREDICTED: Oryza sativa Japonica Group probable prolyl 4-hydroxylase 4 (LOC107280232), transcript variant X3, mRNA probable prolyl 4-hydroxylase 4(LOC107280232) coding protein psRNATarget
XM_015773327.1
ncRNA:22   AAGGUACUGGUCUCAGCGACGA   1
  ||||||*||||||*||||||||
targets:456   UUCCAUUACCAGAAUCGCUGCU   477

2.5 PREDICTED: Oryza sativa Japonica Group probable prolyl 4-hydroxylase 4 (LOC107280232), transcript variant X2, mRNA probable prolyl 4-hydroxylase 4(LOC107280232) coding protein psRNATarget
XM_015773326.1
ncRNA:22   AAGGUACUGGUCUCAGCGACGA   1
  ||||||*||||||*||||||||
targets:547   UUCCAUUACCAGAAUCGCUGCU   568

2.5 PREDICTED: Oryza sativa Japonica Group probable prolyl 4-hydroxylase 4 (LOC107280232), transcript variant X1, mRNA probable prolyl 4-hydroxylase 4(LOC107280232) coding protein psRNATarget
AK068947.1
ncRNA:22   AAGGUACUGGUCUCAGCGACGA   1
  **||||||=|||||||*|||||
targets:2295   CGCCAUGAUCAGAGUCUCUGCU   2316

2.5 Oryza sativa Japonica Group cDNA clone:J023001A13, full insert sequence NA coding protein psRNATarget
XM_015770997.1
ncRNA:22   AAGGUACUGGUCUCAGCGACGA   1
  **||||||=|||||||*|||||
targets:2372   CGCCAUGAUCAGAGUCUCUGCU   2393

2.5 PREDICTED: Oryza sativa Japonica Group U-box domain-containing protein 35 (LOC4328739), mRNA U-box domain-containing protein 35(LOC4328739) coding protein psRNATarget