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BaseInfo

ncRNA ID novel_zma_miR10873
Species Zea mays
Class miRNA
Genome position Chr5:13445417-13445494 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 21
Mature sequence(if miRNA) 1 - AUCCCGAGAGGAUCGGAGGGG - 21
Stem-loop(if miRNA) --      A                            GA
  AUCCCG GAGGAUCGGAGGGGAUUGAGGGGGAAAU  A
  |||||| ||||||||||||||||||||||||||||
  UAGGGC CUCCUAGCCUCCCCUAACUCCCCCUUUA  C
CC      C                            AU
Stem-loop sequence AUCCCGAGAGGAUCGGAGGGGAUUGAGGGGGAAAUGAACUAAUUUCCCCCUCAAUCCCCUCCGAUCCUCCCGGGAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ098881.1
ncRNA:21   GGGGAGGCUAGGAGAGCCCUA   1
  |||||||*|||||||||||||
targets:88   CCCCUCCAAUCCUCUCGGGAU   108

1.0 TSA: Zea mays contig34536, mRNA sequence NA coding protein psRNATarget
EU950017.1
ncRNA:21   GGGGAGGCUAGGAGAGCCCUA   1
  |=||||||||||||*||||||
targets:493   CUCCUCCGAUCCUCCCGGGAU   513

1.5 Zea mays clone 457681 mRNA sequence NA coding protein psRNATarget