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BaseInfo

ncRNA ID novel_zma_miR10872
Species Zea mays
Class miRNA
Genome position Chr5:138959370-138959444 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AUAUGUAGAAACCUAGUCGGCCCU - 24
Stem-loop(if miRNA) --AUA                 C CU  C    AAUC
     UGUAGAAACCUAGUCGG C  CA AUGA    A
     ||||||||||||||||| |  || ||||    U
     ACAUCUUUGGAUCGGCC G  GU UAUU    A
GAUAC                 U AG  U    CAAA
Stem-loop sequence AUAUGUAGAAACCUAGUCGGCCCUCACAUGAAAUCAUAAAACUUAUUUGGAGUCCGGCUAGGUUUCUACACAUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546111.1
ncRNA:24   UCCCGGCUGAUCCAAAGAUGUAUA   1
  =*||||*|||||||||*|||||||
targets:3959   GAGGCCUACUAGGUUUGUACAUAU   3982

2.5 PREDICTED: Zea mays receptor-like protein 12 (LOC103642583), mRNA NA coding protein psRNATarget