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BaseInfo

ncRNA ID novel_zma_miR10871
Species Zea mays
Class miRNA
Genome position Chr5:132986127-132986316 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AUAAAAAUGUAAUUUGCCGAGUGU - 24
Stem-loop(if miRNA) ----AUA     GUA               -A  AA  A            UAGC                CUAGUUGACACUCGGCAAAGAAAAGU
       AAAAU   AUUUGCCGAGUGUCC  GA  UG CACUUGGCAAAG    CUUUGUCGAGUGUCAG                          A
       |||||   |||||||||||||||  ||  || ||||||||||||    ||||||||||||||||                          A
       UUUUA   UGAACGGCUCACGGG  CU  AC GUGAGCCGUUUC    AGAAACGGCUCACAGG                          A
AUUAAAA     -UG               GG  AG  C            -CGC                GGACCCGAUGUGAGCCGUUUCUAAUA
Stem-loop sequence AUAAAAAUGUAAUUUGCCGAGUGUCCAGAAAUGACACUUGGCAAAGUAGCCUUUGUCGAGUGUCAGCUAGUUGACACUCGGCAAAGAAAAGUAAAAUAAUCUUUGCCGAGUGUAGCCCAGGGGACACUCGGCAAAGACGCCUUUGCCGAGUGCCAGAUCGGGGGCACUCGGCAAGUGUAUUUUAAAAUUA