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BaseInfo

ncRNA ID novel_zma_miR10865
Species Zea mays
Class miRNA
Genome position Chr5:10018186-10018280 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 21
Mature sequence(if miRNA) 1 - CUAACUCCUCACACCUUGGCC - 21
Stem-loop(if miRNA) --          A                    -    -  CC  AGG
  CUAACUCCUC CACCUUGGCCACUUAGUUCA AAUU CU  AC   U
  |||||||||| |||||||||||||||||||| |||| ||  ||   G
  GAUUGGGGAG GUGGAGCCGGUGAAUCGGGU UUAG GA  UG   A
UA          G                    A    U  AA  AUU
Stem-loop sequence CUAACUCCUCACACCUUGGCCACUUAGUUCAAAUUCUCCACAGGUGAUUAGUAAAGUGAUUAUGGGCUAAGUGGCCGAGGUGGGAGGGGUUAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU947991.1
ncRNA:21   CCGGUUCCACACUCCUCAAUC   1
  ***|||*|||||||||||||*
targets:88   CUACAAUGUGUGAGGAGUUAA   108

3.0 Zea mays clone 368260 mRNA sequence NA coding protein psRNATarget