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BaseInfo

ncRNA ID	novel_zma_miR10863
Species	Zea mays
Class	miRNA
Genome position	Chr5:94321207-94321309 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	80 - AAUCCCCUCUAUUACCCUUGGUCC - 103
Stem-loop(if miRNA)	--AG    U                   G GU       A        AAAA     CAAG GUAAUGGAGGGGAUUGAGG G  CAAAAUC CUUACUAU    U     |||| ||||||||||||||||||| |  ||||||| ||||||||     GUUC CAUUAUCUCCCCUAACUCC C  GUUUUAG GAAUGAUA    U CCUG    C                   - UG       A        AUUU
Stem-loop sequence	AGCAAGUGUAAUGGAGGGGAUUGAGGGGGUCAAAAUCACUUACUAUAAAAUUUUUAAUAGUAAGAGAUUUUGGUCCCUCAAUCCCCUCUAUUACCCUUGGUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406027.1	ncRNA:24   CCUGGUUCCCAUUAUCUCCCCUAA   1   |||*=||||||||||||||||||| targets:14   GGAGUAAGGGUAAUAGAGGGGAUU   37 Target Full Sequence	0.0	Sequence 4152 from Patent EP2074227	NA	coding protein	psRNATarget
JB166488.1	ncRNA:24   CCUGGUUCCCAUUAUCUCCCCUAA   1   |||*=||||||||||||||||||| targets:14   GGAGUAAGGGUAAUAGAGGGGAUU   37 Target Full Sequence	0.0	Sequence 4152 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238157.1	ncRNA:24   CCUGGUUCCCAUUAUCUCCCCUAA   1   |||*=||||||||||||||||||| targets:14   GGAGUAAGGGUAAUAGAGGGGAUU   37 Target Full Sequence	0.0	Sequence 4152 from Patent EP2985353	NA	coding protein	psRNATarget
BT062966.1	ncRNA:24   CCUGGUUCCCAUUAUCUCCCCUAA   1   |||*=||||||||||||||||||| targets:2550   GGAGUAAGGGUAAUAGAGGGGAUU   2573 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0013E16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174804.1	ncRNA:24   CCUGGUUCCCAUUAUCUCCCCUAA   1   |||*=||||||||||||||||||| targets:2550   GGAGUAAGGGUAAUAGAGGGGAUU   2573 Target Full Sequence	0.0	Zea mays Eukaryotic translation initiation factor isoform 4G-2 (umc1280), mRNA	NA	coding protein	psRNATarget
XM_008663899.2	ncRNA:24   CCUGGUUCCCAUUAUCUCCCCUAA   1   |||*=||||||||||||||||||| targets:2638   GGAGUAAGGGUAAUAGAGGGGAUU   2661 Target Full Sequence	0.0	PREDICTED: Zea mays Eukaryotic translation initiation factor isoform 4G-2 (umc1280), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ054947.1	ncRNA:23   CUGGUUCCCAUUAUCUCCCCUAA   1   *|*||||*|||||=||||||||| targets:1   AAACAAGAGUAAUGGAGGGGAUU   23 Target Full Sequence	2.5	TSA: Zea mays contig56069, mRNA sequence	NA	coding protein	psRNATarget