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BaseInfo

ncRNA ID novel_zma_miR10857
Species Zea mays
Class miRNA
Genome position Chr5:69838255-69838313 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 22
Mature sequence(if miRNA) 1 - UCGGGCUGUUUCUCGAGUGCCU - 22
Stem-loop(if miRNA) --     CU         - U  CUC   G
  UCGGG  GUUUCUCGA G GC   UCC U
  |||||  ||||||||| | ||   |||
  GGCCC  CAGAGAGUU C UG   AGG A
AG     AC         G U  UCC   A
Stem-loop sequence UCGGGCUGUUUCUCGAGUGCCUCUCCGUAAGGACCUGUUCGUUGAGAGACCACCCGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542196.1
ncRNA:22   UCCGUGAGCUCUUUGUCGGGCU   1
  |||=||||||||||||*|||||
targets:1875   AGGUACUCGAGAAACAACCCGA   1896

2.5 PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X6, mRNA NA coding protein psRNATarget