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BaseInfo

ncRNA ID	novel_zma_miR10847
Species	Zea mays
Class	miRNA
Genome position	Chr4:46341804-46341861 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - GGCACUCGGCAAAGAAGGACACCU - 24
Stem-loop(if miRNA)	--                   --CAC U G   GGCACUCGGCAAAGAAGGA     C G A   |||||||||||||||||||     | |   UCGUGAGCCGUUUCUUCCU     G C A UG                   AAAUU C A
Stem-loop sequence	GGCACUCGGCAAAGAAGGACACCUGGAAACCGUUAAAUCCUUCUUUGCCGAGUGCUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170246.1	ncRNA:24   UCCACAGGAAGAAACGGCUCACGG   1   ||*|-|||*||||||||||||||| targets:11   AGAU-UCCAUCUUUGCCGAGUGCC   33 Target Full Sequence	1.0	Sequence 7910 from Patent EP2559767	NA	coding protein	psRNATarget
HI409785.1	ncRNA:24   UCCACAGGAAGAAACGGCUCACGG   1   ||*|-|||*||||||||||||||| targets:11   AGAU-UCCAUCUUUGCCGAGUGCC   33 Target Full Sequence	1.0	Sequence 7910 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241915.1	ncRNA:24   UCCACAGGAAGAAACGGCUCACGG   1   ||*|-|||*||||||||||||||| targets:11   AGAU-UCCAUCUUUGCCGAGUGCC   33 Target Full Sequence	1.0	Sequence 7910 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:24   UCCACAGGAAGAAACGGCUCACGG   1   =*****|||||||||||||||||| targets:8   GCAAAGCCUUCUUUGCCGAGUGCC   31 Target Full Sequence	1.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
BT055423.1	ncRNA:24   UCCACAGGAAGAAACGGCUCACGG   1   *******||||||||||||||||| targets:137   CAAAUAACUUCUUUGCCGAGUGCC   160 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   UCCACAGGAAGAAACGGCUCACGG   1   *******||||||||||||||||| targets:137   CAAAUAACUUCUUUGCCGAGUGCC   160 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   UCCACAGGAAGAAACGGCUCACGG   1   *******||||||||||||||||| targets:2156   CAAAUAACUUCUUUGCCGAGUGCC   2179 Target Full Sequence	2.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   UCCACAGGAAGAAACGGCUCACGG   1   *******||||||||||||||||| targets:2156   CAAAUAACUUCUUUGCCGAGUGCC   2179 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget