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BaseInfo

ncRNA ID	novel_zma_miR10838
Species	Zea mays
Class	miRNA
Genome position	Chr4:78790358-78790488 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	25
Mature sequence(if miRNA)	107 - AAAUGUUUGGAGAAAGUUGUGAGAC - 131
Stem-loop(if miRNA)	--A                      A                       -  -C     U    - U    AAUGUUUGGAGAAAGUUGUGAG CACUAUGUGUAGAAACCUAAGAG AC  CACAU GAAA C C    |||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||| |||| | U    UUACAAACCUCUUUCAACACUC GUGAUACACAUCUUUGGAUUCUC UG  GUGUA CUUU G A AUC                      C                       C  AU     -    A U
Stem-loop sequence	AAAUGUUUGGAGAAAGUUGUGAGACACUAUGUGUAGAAACCUAAGAGACCCACAUUGAAACUCUAUGAUUUCAUGUGUAGUCCUCUUAGGUUUCUACACAUAGUGCCUCACAACUUUCUCCAAACAUUCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235352.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   ||||||||||||||||||||||||* targets:161   GUCUCACAACUUUCUCCAAACAUUC   185 Target Full Sequence	1.0	Sequence 1347 from Patent EP2985353	NA	coding protein	psRNATarget
JB163683.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   ||||||||||||||||||||||||* targets:161   GUCUCACAACUUUCUCCAAACAUUC   185 Target Full Sequence	1.0	Sequence 1347 from Patent EP2559767	NA	coding protein	psRNATarget
HI403222.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   ||||||||||||||||||||||||* targets:161   GUCUCACAACUUUCUCCAAACAUUC   185 Target Full Sequence	1.0	Sequence 1347 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235350.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   |||||||||||||*||||||||||* targets:161   GUCUCACAACUUUGUCCAAACAUUC   185 Target Full Sequence	2.5	Sequence 1345 from Patent EP2985353	NA	coding protein	psRNATarget
JB163681.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   |||||||||||||*||||||||||* targets:161   GUCUCACAACUUUGUCCAAACAUUC   185 Target Full Sequence	2.5	Sequence 1345 from Patent EP2559767	NA	coding protein	psRNATarget
HI403220.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   |||||||||||||*||||||||||* targets:161   GUCUCACAACUUUGUCCAAACAUUC   185 Target Full Sequence	2.5	Sequence 1345 from Patent EP2074227	NA	coding protein	psRNATarget
JB163670.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   *|*|||||||||||||*|||||||* targets:167   AUGUCACAACUUUCUCGAAACAUUC   191 Target Full Sequence	2.5	Sequence 1334 from Patent EP2559767	NA	coding protein	psRNATarget
HI403209.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   *|*|||||||||||||*|||||||* targets:167   AUGUCACAACUUUCUCGAAACAUUC   191 Target Full Sequence	2.5	Sequence 1334 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235339.1	ncRNA:25   CAGAGUGUUGAAAGAGGUUUGUAAA   1   *|*|||||||||||||*|||||||* targets:167   AUGUCACAACUUUCUCGAAACAUUC   191 Target Full Sequence	2.5	Sequence 1334 from Patent EP2985353	NA	coding protein	psRNATarget