ncRNA ID | novel_zma_miR10836 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:41718480-41718554 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100248;SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 52 - AAACUGUAACGCCCUGAAUUUGGG - 75 |
Stem-loop(if miRNA) |
--AAACU        C         -   U    UUUUG        GUAACGCC UGAAUUUGG GGG AGAA     U        |||||||| ||||||||| ||| ||||        CAUUGCGG ACUUAAACC CUC UCUU     C CCUUUCC        -         A   -    UUCUU |
Stem-loop sequence | AAACUGUAACGCCCUGAAUUUGGGGGUAGAAUUUUGUCUUCUUUUCUCUCACCAAAUUCAGGCGUUACCCUUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020539096.1 |
|
2.5 | PREDICTED: Zea mays AP3-complex subunit beta-A (LOC100383432), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001351147.1 |
|
2.5 | Zea mays AP3-complex subunit beta-A (LOC100383432), mRNA | NA | coding protein | psRNATarget |