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BaseInfo

ncRNA ID novel_zma_miR10827
Species Zea mays
Class miRNA
Genome position Chr4:112448699-112448789 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - ACUUCCUACGGCUGUACUCUAGGA - 24
Stem-loop(if miRNA) --   -C GC     C           U              AAAU
  CUA  G  CAGCU UAGGAAGUUAC UAACUUCCUAGAGU    G
  |||  |  ||||| ||||||||||| ||||||||||||||
  GAU  C  GUCGG AUCCUUCAAUG AUUGAAGGAUCUCA    U
AG   CU AU     C           U              AACA
Stem-loop sequence CUACGGCCAGCUCUAGGAAGUUACUUAACUUCCUAGAGUAAAUGUACAAACUCUAGGAAGUUAUGUAACUUCCUACGGCUGUACUCUAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   AGGAUCUCAUGUCGGCAUCCUUCA   1
  ||||||||||*||||||||*||||
targets:888   UCCUAGAGUAAAGCCGUAGCAAGU   911

2.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget