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BaseInfo

ncRNA ID	novel_zma_miR10819
Species	Zea mays
Class	miRNA
Genome position	Chr4:159321793-159321891 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	25
Mature sequence(if miRNA)	1 - AUACAUGUGGAUUGAGAUAAAUACU - 25
Stem-loop(if miRNA)	--UAUUAAC                       A    UAC     C             CUUAAUCCAUAUGUAUUGAGGUG AUUG   UGUAA UUAA          ||||||||||||||||||||||| ||||   ||||| |||A          GAGUUAGGUGUACAUAACUCCAU UAAU   ACAUU AAUC UCAUAAAUA                       C    UCC     U
Stem-loop sequence	UAUUAACCUUAAUCCAUAUGUAUUGAGGUGAAUUGUACUGUAACUUAAACUAAUUUACACCUUAAUCUACCUCAAUACAUGUGGAUUGAGAUAAAUACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235096.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|||||||||=|||||||| targets:3   AGUAUUGAUCUCAAUCUACAUGUAU   27 Target Full Sequence	2.5	Sequence 1091 from Patent EP2985353	NA	coding protein	psRNATarget
JB163427.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|||||||||=|||||||| targets:3   AGUAUUGAUCUCAAUCUACAUGUAU   27 Target Full Sequence	2.5	Sequence 1091 from Patent EP2559767	NA	coding protein	psRNATarget
HI402966.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|||||||||=|||||||| targets:3   AGUAUUGAUCUCAAUCUACAUGUAU   27 Target Full Sequence	2.5	Sequence 1091 from Patent EP2074227	NA	coding protein	psRNATarget
JB167413.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   *|||||*||||||||||||||||=| targets:3   UGUAUUCAUCUCAAUCCACAUGUGU   27 Target Full Sequence	2.5	Sequence 5077 from Patent EP2559767	NA	coding protein	psRNATarget
HI406952.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   *|||||*||||||||||||||||=| targets:3   UGUAUUCAUCUCAAUCCACAUGUGU   27 Target Full Sequence	2.5	Sequence 5077 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239082.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   *|||||*||||||||||||||||=| targets:3   UGUAUUCAUCUCAAUCCACAUGUGU   27 Target Full Sequence	2.5	Sequence 5077 from Patent EP2985353	NA	coding protein	psRNATarget
HI403017.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|*|||||||||||||||| targets:3   AGUAUUGACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1142 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235147.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|*|||||||||||||||| targets:3   AGUAUUGACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1142 from Patent EP2985353	NA	coding protein	psRNATarget
JB163478.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|*|||||||||||||||| targets:3   AGUAUUGACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1142 from Patent EP2559767	NA	coding protein	psRNATarget
HI402996.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|*|||||||||||||||| targets:3   AGUAUUCACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1121 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235126.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|*|||||||||||||||| targets:3   AGUAUUCACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1121 from Patent EP2985353	NA	coding protein	psRNATarget
JB163457.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||||||*|*|||||||||||||||| targets:3   AGUAUUCACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1121 from Patent EP2559767	NA	coding protein	psRNATarget
NM_001112411.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   *||*||*|||||||||||=|||||| targets:1622   CGUUUUGAUCUCAAUCCAUAUGUAU   1646 Target Full Sequence	2.5	Zea mays uncharacterized LOC732794 (IDP506), mRNA	NA	coding protein	psRNATarget
AF277454.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   *||*||*|||||||||||=|||||| targets:1622   CGUUUUGAUCUCAAUCCAUAUGUAU   1646 Target Full Sequence	2.5	Zea mays UMP synthase (UMPS) mRNA, UMPS-1 allele, complete cds	NA	coding protein	psRNATarget
LQ235080.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||*|||*|*|||||||||||||||| targets:3   AGCAUUGACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1075 from Patent EP2985353	NA	coding protein	psRNATarget
JB163411.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||*|||*|*|||||||||||||||| targets:3   AGCAUUGACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1075 from Patent EP2559767	NA	coding protein	psRNATarget
HI402950.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ||*|||*|*|||||||||||||||| targets:3   AGCAUUGACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1075 from Patent EP2074227	NA	coding protein	psRNATarget
JB163470.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   **||||*|*|||||||||||||||| targets:3   CAUAUUCACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1134 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235139.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   **||||*|*|||||||||||||||| targets:3   CAUAUUCACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1134 from Patent EP2985353	NA	coding protein	psRNATarget
HI403009.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   **||||*|*|||||||||||||||| targets:3   CAUAUUCACCUCAAUCCACAUGUAU   27 Target Full Sequence	2.0	Sequence 1134 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008677341.2	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ***|*|*|||||||||||||||||| targets:2910   CUCAAUCAUCUCAAUCCACAUGUAU   2934 Target Full Sequence	1.0	PREDICTED: Zea mays cation/H(+) antiporter 15 (LOC103651657), mRNA	NA	coding protein	psRNATarget
XM_020550625.1	ncRNA:25   UCAUAAAUAGAGUUAGGUGUACAUA   1   ***|*|*|||||||||||||||||| targets:2894   CUCAAUCAUCUCAAUCCACAUGUAU   2918 Target Full Sequence	1.0	PREDICTED: Zea mays cation/H(+) antiporter 15-like (LOC109944899), mRNA	NA	coding protein	psRNATarget