ncRNA ID | novel_zma_miR10813 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:215042589-215042779 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUCCACUGGCGGCUGUAUUAAGC - 23 |
Stem-loop(if miRNA) |
----UU      G       A            C   A C          U         UAU                          UUAUUA   A       UGCAGC GCUAGUG AAAUAGCAUUUC ACU G GGCUGUAUUA GUAAACCGC   UGGAAAUAACAUUUCCAUUGGCGGCU      AGC A       |||||| ||||||| |||||||||||| ||| | |||||||||| |||||||||   ||||||||||||||||||||||||||      ||| A       AUGUCG CGGUCAC UUUAUUGUAAAG UGA C CCGACAUAAU CGUUUGGUG   ACCUUUAUUGUAAAGGUAACCGCCGA      UCG A CGAAUU      G       C            A   C U          U         UUC                          ------   C |
Stem-loop sequence | UUUGCAGCGGCUAGUGAAAAUAGCAUUUCCACUAGCGGCUGUAUUAUGUAAACCGCUAUUGGAAAUAACAUUUCCAUUGGCGGCUUUAUUAAGCAAAACGCUAGCCGCCAAUGGAAAUGUUAUUUCCACUUGUGGUUUGCUUAAUACAGCCUCCAGUAGAAAUGUUAUUUCCACUGGCGGCUGUAUUAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU950653.1 |
|
3.0 | Zea mays clone 506422 mRNA sequence | NA | coding protein | psRNATarget |