ncRNA ID | novel_zma_miR10812 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:113877181-113877288 [-] |
Reference genome | RefGen_v4 |
Source | SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 85 - ACAAAACCGGAGGAGAUUGGAGGG - 108 |
Stem-loop(if miRNA) |
--   A       -  A                    C        CAA    AA   ACA AACCGGA GG GAUUGGAGGGGCUAGAAUCC UAUCUUAU   AUAA  C   ||| ||||||| || |||||||||||||||||||| ||||||||   ||||   UGU UUGGCUU CC CUAAUCUCUCCGAUUUUAGG GUAGAAUA   UAUU  A AG   G       A  -                    A        AAC    CU |
Stem-loop sequence | ACAAAACCGGAGGAGAUUGGAGGGGCUAGAAUCCCUAUCUUAUCAAAUAAAACAUCUUAUCAAAUAAGAUGAGGAUUUUAGCCUCUCUAAUCCCAUUCGGUUGUGUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020539411.1 |
|
2.5 | PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020539397.1 |
|
2.5 | PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA | NA | coding protein | psRNATarget |