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BaseInfo

ncRNA ID novel_zma_miR10812
Species Zea mays
Class miRNA
Genome position Chr7:113877181-113877288 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 85 - ACAAAACCGGAGGAGAUUGGAGGG - 108
Stem-loop(if miRNA) --   A       -  A                    C        CAA    AA
  ACA AACCGGA GG GAUUGGAGGGGCUAGAAUCC UAUCUUAU   AUAA  C
  ||| ||||||| || |||||||||||||||||||| ||||||||   ||||
  UGU UUGGCUU CC CUAAUCUCUCCGAUUUUAGG GUAGAAUA   UAUU  A
AG   G       A  -                    A        AAC    CU
Stem-loop sequence ACAAAACCGGAGGAGAUUGGAGGGGCUAGAAUCCCUAUCUUAUCAAAUAAAACAUCUUAUCAAAUAAGAUGAGGAUUUUAGCCUCUCUAAUCCCAUUCGGUUGUGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539411.1
ncRNA:24   GGGAGGUUAGAGGAGGCCAAAACA   1
  ||||||||||*||||||||*||||
targets:3504   CCCUCCAAUCCCCUCCGGUAUUGU   3527

2.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020539397.1
ncRNA:24   GGGAGGUUAGAGGAGGCCAAAACA   1
  ||||||||||*||||||||*||||
targets:3539   CCCUCCAAUCCCCUCCGGUAUUGU   3562

2.5 PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA NA coding protein psRNATarget