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BaseInfo

ncRNA ID novel_zma_miR10804
Species Zea mays
Class miRNA
Genome position Chr10:59853847-59853922 [-]
Reference genome RefGen_v4
Source SRR5100248;SRR5100255
Length 24
Mature sequence(if miRNA) 53 - AGAUUGUAACACCCUGAAUUUGGG - 76
Stem-loop(if miRNA) --   UU        C         -      AAAAUUU
  AGA  GUAACACC UGAAUUUGG GGGUAU       U
  |||  |||||||| ||||||||| ||||||
  UCU  CAUUGUGG ACUUAAACC CCUAUA       C
AC   CU        -         A      AUCUUUU
Stem-loop sequence AGAUUGUAACACCCUGAAUUUGGGGGUAUAAAAUUUUCUUUUCUAAUAUCCACCAAAUUCAGGUGUUACUCUCUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008669578.2
ncRNA:24   GGGUUU-AAGUCCCACAAUGUUAGA   1
  ||=|||-|||||||||||||||||*
targets:2286   CCUAAAAUUCAGGGUGUUACAAUCG   2310

3.0 PREDICTED: Zea mays uncharacterized LOC100279556 (LOC100279556), transcript variant X1, mRNA NA coding protein psRNATarget