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BaseInfo

ncRNA ID novel_zma_miR10798
Species Zea mays
Class miRNA
Genome position Chr4:213554264-213554337 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - GACACUCGGUAAAGGGCUCUUUGC - 24
Stem-loop(if miRNA) --                             UUCACA
  GACACUCGGUAAAGGGCUCUUUGCCGAGU      A
  |||||||||||||||||||||||||||||
  UUGUGAGCCGUUUCUCGAGAAACGGCUCA      A
UU                             CAACAU
Stem-loop sequence GACACUCGGUAAAGGGCUCUUUGCCGAGUUUCACAAAUACAACACUCGGCAAAGAGCUCUUUGCCGAGUGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167154.1
ncRNA:24   CGUUUCUCGGGAAAUGGCUCACAG   1
  |||||||||=||||=|||||||||
targets:60   GCAAAGAGCUCUUUGCCGAGUGUC   83

2.5 Sequence 4818 from Patent EP2559767 NA coding protein psRNATarget
HI406693.1
ncRNA:24   CGUUUCUCGGGAAAUGGCUCACAG   1
  |||||||||=||||=|||||||||
targets:60   GCAAAGAGCUCUUUGCCGAGUGUC   83

2.5 Sequence 4818 from Patent EP2074227 NA coding protein psRNATarget
LQ238823.1
ncRNA:24   CGUUUCUCGGGAAAUGGCUCACAG   1
  |||||||||=||||=|||||||||
targets:60   GCAAAGAGCUCUUUGCCGAGUGUC   83

2.5 Sequence 4818 from Patent EP2985353 NA coding protein psRNATarget